PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PSME_00008136-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pseudotsuga
Family bZIP
Protein Properties Length: 572aa    MW: 62598.5 Da    PI: 9.0361
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PSME_00008136-RAgenomePRSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.28.5e-093714092563
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       +ae+eeL+e+v +L+aeN  L+ e+++l++e +klks++
  PSME_00008136-RA 371 QAECEELAERVGTLKAENVVLRTEMNRLEQEHKKLKSDN 409
                       89***********************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.5E-15126185IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.5E-11219328No hitNo description
CDDcd147023.90E-6371402No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-4371407No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MEEVLFFIFS NLHDIAFSDC GIHGKVIKQT SRYPSWIMGT GEMGRLNRTE KASTTKVICT  60
LKLFVVAVSI ESIVVNVIAT SKKVVVLIGN KLPLPLPWFT LIGLLHFRQW QSLDLVSSPL  120
PNLCLAYYSS ATTPMPPPGY FHSTMALSPQ PHPYMRGVQP LMPLYGTPPT LYAALYTHGG  180
MYANAPGAHP YGPYGIPPPG VINESAAGVS TGITEAMTKF SGVKDQSPPK SSETGSEGSS  240
EECDDSSQNG SSAEQKISSG QASMVHTVNT TTRSQGGTGH AASGGKETNT SVDQAIAAMP  300
ISVAGKSATV TGLTINLNIG IGYWSMSAPT PISAICGRRP CAPLTTGLVP SAQNMPLIGH  360
PDSLPTELWL QAECEELAER VGTLKAENVV LRTEMNRLEQ EHKKLKSDNA SLRKTLLRTD  420
SEWFSIYFGK LKEKKIKTEH EKSKNSMSQI PTALLIIEDV TQTSTVAPIP RDGRRETEDL  480
GLELHVIIYQ LLVEVQDPGI IRFRFNFVKA AMLQLRDIRF LLSYIKAAML YPPLSLTLIP  540
LKIRFRFNFV KAAMLQLRDI RFLLSYIKAA ML
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1023211e-107BT102321.1 Picea glauca clone GQ0178_P15 mRNA sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-24basic region/leucine zipper transcription factor 16